CDS

Accession Number TCMCG016C28792
gbkey CDS
Protein Id OMO50361.1
Location complement(join(11059..11079,11208..11309,11831..11878,11982..12116,12382..12507,13073..13156,13294..13403,13494..13593,14101..14710,15162..15238,15381..15473,15614..15700,15960..16244))
Organism Corchorus capsularis
locus_tag CCACVL1_30488

Protein

Length 625aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01016182.1
Definition hypothetical protein CCACVL1_30488 [Corchorus capsularis]
Locus_tag CCACVL1_30488

EGGNOG-MAPPER Annotation

COG_category S
Description chromatin organization
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K17492        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030874        [VIEW IN EMBL-EBI]
GO:0030875        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034728        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGATAAGAGTGGTGGTGGCGGAGAGGCCGCCGCCGCTGCTTCTGGCGGTGGTGAGCCCTCGCGAGTGCCGCCGCCGAAGGTGATGAAGGCTCGTGACCGCCAAGTTTTCACGGTTGAGCTCCGACCCGGGGAGACTACGTACGTTTCCTGGAAGAAGCTTGTTAAAGACGCCAACCGAGCCATTGGATCTTCCGCCGCTGCCGCCCCCGCCGCGCCGTCGGTATCAGCACCGGAGCCGCCTCCTAATGCCCATCCTAACCTCCAGTCTCGTATTGCCCCTGGTCAAGCGGCTGAAAAAGAAGAGAAGGATGATCAGGCTCCCAATCGTTTCAGTGCTGTTATTGAGAAGATTGAACGTCTTTACATGGGTAAAGATAGCAGTGATGAGGAAGAACTGGATGAAACCCCAGATGATGATCAGTATGATACAGAAGACTCTTTCATTGATGATGCGGAGCTGGATGAGTATTTTGAAGTGGATAATTCAGCAATAAAACATGATGGATTCTTTGTTAATAGAGGAAAGTTGGAAAGAATAAATGAACCCCCTGTGATAACTAATCAGCAGCCCAAGAAAAGGCGAAGAAAAGATACTGCAAAACCTCTTGGTGAGAGTGATGACGGTCGTGTGTCAAATAAACATGTAAAGGCAGCAAAAATAACTGCAGGGAGGGCTGAACCTTCTCTTGGAAGGAATAATTTTAATCATTCACAGAATTTGTCCACATTAAAGGAACAGTATGTGGATTTAAAATCTCAGAATCAGTTATCAGTTTCTGGTGTTTCATCCAAGAAGAAATCTTCTGATACAAGACTAGCATCAGATCCTTCTTCACATTTGAAAGTTTCTAATGGTGATAGTCCTGTACCTGTGGCAAATGTGAAGGATATTGAAAAGTCGAAGGTAGGAGTTCTGCAGTCAAAAAATGTTTTCAGTAACAAATTGAAAGATGGAAGTGGATCCTCTGACATTTTGCATCAGAAATACCACGATAAGAATGCTTACGTACAATCCAAGTACCAACATGGAAAACCAATCAGCAACACTGATGAGCTTGATCAATCGGTTCGACCAAGAGAAAAAAATGGCACCCGTGAGCTGCCAGACATTAATGTTTCTGATGGCAGATATGCTATGCATGTAGCAAAATCTTCACAAACGCAGAAAAAGGATGGTTCTACTCTTAGGCCCAAAGGTTCAATGCTTGAAAGGTCCATTAGGGAGCTAGAGAAGATGGTAGCAGAATCAAGGCCACCTGCTATGGAAAATCAAGAGGCTGATAATTCATCCCAGGGTATTAAGAGGAGATTGCCTAGAGAAATAAAGTTGAAGCTAGCTAAAGTTGCTAGATTAGCGGCCAGTCAGGGGAAAGTATCTAAGGAGCTACTAAATCGCCTTATGAGTATCCTTGGTCACTTAATACAACTAAGAACACTTAAGAGGAACCTGAAAATCATGATTAGTACGGGTTTGTCAGCAAAACAAGAAAAAGATGATAGGTTCCAACTGATAAAGAAGGAAGTTGTTGAGATGATAAAGACTAGAGGTCCTTCTCTTGAGTCAAAGGCTTTGGAGCAACAAGCTGGAGCATCTGATGATTTTCAAGAAAATGCTTCTGATGAAAGAGCTCTTAAAAAGAAATTCAGCATGGATGCACCGTTGGAGGACAAAATTTGTGATCTTTATGACCTCTATGTTGATGGATTGGATGAAGATGCAGGTCCACAGATACGGAAGCTTTATGTAGAGCTTGCGCAGCTATGGCCAAATGGTCTGATGGACAATCATGGGATTAAACGTGCAATTTGTAGGGCAAAGGAAAGACGGAAAGCAATTTACAATAGACATAAGATTGGATGCAAGTCATCCTGA
Protein:  
MDDKSGGGGEAAAAASGGGEPSRVPPPKVMKARDRQVFTVELRPGETTYVSWKKLVKDANRAIGSSAAAAPAAPSVSAPEPPPNAHPNLQSRIAPGQAAEKEEKDDQAPNRFSAVIEKIERLYMGKDSSDEEELDETPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPPVITNQQPKKRRRKDTAKPLGESDDGRVSNKHVKAAKITAGRAEPSLGRNNFNHSQNLSTLKEQYVDLKSQNQLSVSGVSSKKKSSDTRLASDPSSHLKVSNGDSPVPVANVKDIEKSKVGVLQSKNVFSNKLKDGSGSSDILHQKYHDKNAYVQSKYQHGKPISNTDELDQSVRPREKNGTRELPDINVSDGRYAMHVAKSSQTQKKDGSTLRPKGSMLERSIRELEKMVAESRPPAMENQEADNSSQGIKRRLPREIKLKLAKVARLAASQGKVSKELLNRLMSILGHLIQLRTLKRNLKIMISTGLSAKQEKDDRFQLIKKEVVEMIKTRGPSLESKALEQQAGASDDFQENASDERALKKKFSMDAPLEDKICDLYDLYVDGLDEDAGPQIRKLYVELAQLWPNGLMDNHGIKRAICRAKERRKAIYNRHKIGCKSS